MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Gemella sp.
GL1.1
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 27
bases: 1,299,399 bps
CDS: 1,245
rRNA: 12
Repeat region:
tmRNA: 1
tRNA: 43
misc RNA:
Total features: 1,301
Total number of protein coding genes annotated/found:
1,245
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Items 21 - 40
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5006|JADGKJ010000010.1
SEQF5006_00005
Genome Viewer
NA
AA
804/268
3702-4505
16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA
SEQF5006|JADGKJ010000010.1
SEQF5006_00006
Genome Viewer
NA
AA
1692/564
4514-6205
DNA repair protein RecN
SEQF5006|JADGKJ010000010.1
SEQF5006_00007
Genome Viewer
NA
AA
870/290
6202-7071
Small ribosomal subunit biogenesis GTPase RsgA
SEQF5006|JADGKJ010000010.1
SEQF5006_00008
Genome Viewer
NA
AA
645/215
7073-7717
Ribulose-phosphate 3-epimerase
SEQF5006|JADGKJ010000010.1
SEQF5006_00009
Genome Viewer
NA
AA
600/200
7735-8334
Thiamine pyrophosphokinase
SEQF5006|JADGKJ010000010.1
SEQF5006_00010
Genome Viewer
NA
AA
849/283
8346-9194
hypothetical protein
SEQF5006|JADGKJ010000010.1
SEQF5006_00011
Genome Viewer
NA
AA
342/114
9191-9532
hypothetical protein
SEQF5006|JADGKJ010000010.1
SEQF5006_00012
Genome Viewer
NA
AA
2181/727
9641-11821
GTP pyrophosphokinase
SEQF5006|JADGKJ010000010.1
SEQF5006_00013
Genome Viewer
NA
AA
459/153
11821-12279
D-aminoacyl-tRNA deacylase
SEQF5006|JADGKJ010000010.1
SEQF5006_00014
Genome Viewer
NA
AA
1428/476
12279-13706
hypothetical protein
SEQF5006|JADGKJ010000010.1
SEQF5006_00015
Genome Viewer
NA
AA
309/103
13850-14158
50S ribosomal protein L21
SEQF5006|JADGKJ010000010.1
SEQF5006_00016
Genome Viewer
NA
AA
330/110
14161-14490
hypothetical protein
SEQF5006|JADGKJ010000010.1
SEQF5006_00017
Genome Viewer
NA
AA
288/96
14493-14780
50S ribosomal protein L27
SEQF5006|JADGKJ010000010.1
SEQF5006_00018
Genome Viewer
NA
AA
1452/484
14923-16374
DEAD-box ATP-dependent RNA helicase CshA
SEQF5006|JADGKJ010000010.1
SEQF5006_00019
Genome Viewer
NA
AA
570/190
16610-17179
Signal peptidase IB
SEQF5006|JADGKJ010000010.1
SEQF5006_00020
Genome Viewer
NA
AA
480/160
17673-17194
Free methionine-R-sulfoxide reductase
SEQF5006|JADGKJ010000010.1
SEQF5006_00021
Genome Viewer
NA
AA
1434/478
17791-19224
Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU
SEQF5006|JADGKJ010000010.1
SEQF5006_00022
Genome Viewer
NA
AA
723/241
19224-19946
Tyrosine-protein phosphatase CpsB
SEQF5006|JADGKJ010000010.1
SEQF5006_00023
Genome Viewer
NA
AA
1212/404
20045-21256
ATP-dependent Clp protease ATP-binding subunit ClpX
SEQF5006|JADGKJ010000010.1
SEQF5006_00024
Genome Viewer
NA
AA
2310/770
21268-23577
Lon protease 1
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Items 21 - 40
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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